NAME
    PyMOLConvertLigandFileFormat.py.py - Convert between ligand file formats

SYNOPSIS
    PyMOLConvertLigandFileFormat.py.py [--overwrite] [-w <dir>] -i <infile>
    -o <outfile>

    PyMOLConvertLigandFileFormat.py.py -h | --help | -e | --examples

DESCRIPTION
    Convert between ligand file formats.

    The supported input and output file formats are: MDLMOL (.mol), MOL2
    (.mol2), and PDB (.pdb).

OPTIONS
    -e, --examples
        Print examples.

    -h, --help
        Print this help message.

    -i, --infile <infile>
        Input file name.

    -o, --outfile <outfile>
        Output file name.

    --overwrite
        Overwrite existing files.

    -w, --workingdir <dir>
        Location of working directory which defaults to the current
        directory.

EXAMPLES
    To convert MDLMOL file format to MOL2 file format, type:

        % PyMOLConvertLigandFileFormat.py -i caffeine.mol -o caffeine.mol2

    To convert MDLMOL file format to PDB file format, type:

        % PyMOLConvertLigandFileFormat.py -i caffeine.mol -o caffeine.pdb

AUTHOR
    Manish Sud(msud@san.rr.com)

SEE ALSO
    PyMOLConvertPMLToPSE.py, PyMOLSplitChainsAndLigands.py,
    PyMOLVisualizeMacromolecules.py

COPYRIGHT
    Copyright (C) 2018 Manish Sud. All rights reserved.

    The functionality available in this script is implemented using PyMOL, a
    molecular visualization system on an open source foundation originally
    developed by Warren DeLano.

    This file is part of MayaChemTools.

    MayaChemTools is free software; you can redistribute it and/or modify it
    under the terms of the GNU Lesser General Public License as published by
    the Free Software Foundation; either version 3 of the License, or (at
    your option) any later version.

